PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021364-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 168aa    MW: 18505.8 Da    PI: 8.5018
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021364-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.72.3e-2354165199
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 
                     lp+G++F+Ptd+el+ e+L++kvegk+      ++++  +i+   +i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+++        
  AUR62021364-RA  54 LPAGVKFDPTDQELI-EHLEAKVEGKSskshplIDEFIpTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 146
                     799************.99********96665443333333666646**********.555666799******************73334555544 PP

             NAM  80 sgyWkatgkdkevlskkgel 99 
                     + +W++tgk+++v++ +g++
  AUR62021364-RA 147 ETRWHKTGKTRPVMV-NGKQ 165
                     778***********9.4444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MNNNNSSNKS QLSSISSASD LIDAKLEEHQ LCGSKQCPGC GHRLEGSKPD WVGLPAGVKF  60
DPTDQELIEH LEAKVEGKSS KSHPLIDEFI PTIEGEDGIC YTHPEKLPGV TRDGLSRHFF  120
HRPSKAYTTG TRKRRKIQTE CDLQGGETRW HKTGKTRPVM VNGKQKG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.13e-90NAC family protein