PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021436-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 172aa    MW: 19268.8 Da    PI: 11.4878
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021436-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-184898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  +g+Wv+eIr+p++   + r++lg+f ++e+Aa+a++ a+++++g
  AUR62021436-RA 48 PVYRGVRRRA-WGKWVSEIREPRK---KSRIWLGTFSSPEMAARAHDVAALSIKG 98
                    68*****777.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MAPKYDQHMY PENSSDASST YNDEAMAINV DENNNSNSKK RQRDTKHPVY RGVRRRAWGK  60
WVSEIREPRK KSRIWLGTFS SPEMAARAHD VAALSIKGSS AVLNFPDLAP SLPRPLSNSP  120
RDVQLAAAKA AALDLTFNIL INNRIVLRLH DRVRGRGTTT RRNSRAAKFG R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25810.19e-42ERF family protein