PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021674-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 701aa MW: 79914.1 Da PI: 7.2775

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021674-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	81.4	9e-26	63	113	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k +s e +s+yF++pi+ AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl AUR62021674-RA 63 SKALSKEIISQYFYMPITRAAKELNVGLTLLKKRCRELGIQRWPHRKLMSL 113 58899*******************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MYDGYGHGFE GLQDLELENM PPPLALCHDE SDYRKDNLHE NKINELRSPE EQETNNNNNH 60 CSSKALSKEI ISQYFYMPIT RAAKELNVGL TLLKKRCREL GIQRWPHRKL MSLQTLIRNV 120 QEMGKEGGDK NEAKLREAIQ ILEQEKKLME EMPDLQLETR TKRLRQACFK ANYKKRKMIN 180 NLNYDIVMPT SLHYNTMIRA FSCSGIPSDG VKFYRMMKRE GVESNHLTLS FCLDCCTENS 240 ALIEGMQIHK SVLVDGYERD CVLMTSLMEL YSGCRRCDDA CKVFDNMPHR DTVAYNALIS 300 CFVNNKRTRD ALSVYKSMLT LERDCRPDEV TCLLLIQACG ELGALDFGRC VVNYMEKHGY 360 GTSMRLSNAL IAMYSKCGCV DDAYRIFERM PTKNLVSWSS MISGFGINGY GKHAVELFWE 420 MHRMGIAPDA KAITAVLYAC SHRGLLDEGL LIFEKMTQEF GIHPNIHHYG CVVDILGRAG 480 SLDQAYDLII SMKDKPDIKV WRTLLMACRM HKNFGLAERV IEHITELKAQ EAGNYILLLN 540 TYSSNGKWNK VRELRKFMEE QGILTTGSST IEVKGMVHKF VVGNVSHPRK DEIYEMLNEI 600 LQQLKIAGYV PEASSELHDL DLIEKETAAS SHSEKLAIAF GVLSTPPSTT IRVANSAQIC 660 DDCHNFAKVF SAVYNRKLII SDPNRIHHFR EGKCSCDYCW *

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MYDGYGHGFE GLQDLELENM PPPLALCHDE SDYRKDNLHE NKINELRSPE EQETNNNNNH  60
CSSKALSKEI ISQYFYMPIT RAAKELNVGL TLLKKRCREL GIQRWPHRKL MSLQTLIRNV  120
QEMGKEGGDK NEAKLREAIQ ILEQEKKLME EMPDLQLETR TKRLRQACFK ANYKKRKMIN  180
NLNYDIVMPT SLHYNTMIRA FSCSGIPSDG VKFYRMMKRE GVESNHLTLS FCLDCCTENS  240
ALIEGMQIHK SVLVDGYERD CVLMTSLMEL YSGCRRCDDA CKVFDNMPHR DTVAYNALIS  300
CFVNNKRTRD ALSVYKSMLT LERDCRPDEV TCLLLIQACG ELGALDFGRC VVNYMEKHGY  360
GTSMRLSNAL IAMYSKCGCV DDAYRIFERM PTKNLVSWSS MISGFGINGY GKHAVELFWE  420
MHRMGIAPDA KAITAVLYAC SHRGLLDEGL LIFEKMTQEF GIHPNIHHYG CVVDILGRAG  480
SLDQAYDLII SMKDKPDIKV WRTLLMACRM HKNFGLAERV IEHITELKAQ EAGNYILLLN  540
TYSSNGKWNK VRELRKFMEE QGILTTGSST IEVKGMVHKF VVGNVSHPRK DEIYEMLNEI  600
LQQLKIAGYV PEASSELHDL DLIEKETAAS SHSEKLAIAF GVLSTPPSTT IRVANSAQIC  660
DDCHNFAKVF SAVYNRKLII SDPNRIHHFR EGKCSCDYCW *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	2e-50	Nin-like family protein