PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021715-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 88aa    MW: 10078.5 Da    PI: 6.5168
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021715-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.14.8e-0617561554
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +i +  ++L+ llP++ +++ +++s  e+Le+++ YI++L
  AUR62021715-RA 17 EISELVFKLQALLPERRRQHLRRVSRDEVLEEVCSYIRKL 56
                    6888889********76888889***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MSSSRILLAS RCATEDEISE LVFKLQALLP ERRRQHLRRV SRDEVLEEVC SYIRKLHKQV  60
DDTSERISQL LASADLDADV LRSLLQQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.12e-15bHLH family protein