PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021718-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 93aa    MW: 10520.9 Da    PI: 10.1073
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021718-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.7e-0719601454
                    HHHHHHHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHHH CS
             HLH 14 driNsafeeLrellPkas.kapskKlsKaeiLekAveYIksL 54
                    d+i +  ++L++llP++    +  K+s + +L+++++YIk L
  AUR62021718-RA 19 DQIQDLVSKLQQLLPELHnTRRPDKVSASRVLQETCNYIKTL 60
                    6899999*********63244445577778**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MSSRRSRSRQ TGGSRITDDQ IQDLVSKLQQ LLPELHNTRR PDKVSASRVL QETCNYIKTL  60
HREVDGLSER LSQLLETTDT TQAALIRSLL MQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47710.13e-39bHLH family protein