PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021815-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 212aa    MW: 24248.2 Da    PI: 8.6457
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021815-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix83.92.1e-2699184186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+ +ev+aLi++r  +++++ +  +k+p W+ev++ m++ g+  rs+ +Ckekwen+nk+ykk +++ +k  se+ ++cpyf++le
  AUR62021815-RA  99 RWPTSEVQALITLRAALDHKFHTIGAKAPVWDEVAAGMAKMGYtPRSARKCKEKWENVNKYYKKATANGNKY-SENAKSCPYFHELE 184
                     8******************************************88********************9999986.788889******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MHQQLMNMIE NKEKDRILRE EAWRQQELER ANRDHQIRAQ EAARNVALIS FIRNALGLSE  60
LQVPDLLSLP QVFSGEDNVA DTQSLGQSEQ DRFDPNYKRW PTSEVQALIT LRAALDHKFH  120
TIGAKAPVWD EVAAGMAKMG YTPRSARKCK EKWENVNKYY KKATANGNKY SENAKSCPYF  180
HELETLYKNR LITSAKSNSP TNEHSEQNAN V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.14e-45Trihelix family protein