PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022078-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 272aa    MW: 29969.9 Da    PI: 9.9013
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022078-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.1e-19109142134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  AUR62022078-RA 109 CSDCHTTTTPLWRSGPQGPKSLCNACGIRQRKAR 142
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MSPVGKLVLS HENKANDLGQ PCSPWLQNTI GDDSGCSYGY SFKLREEVKI ETPVNYNNND  60
QNKYSRSKWK PSKVRIMQKI ATSKDSRDSR KQLDHDLAKR QNNDGIRVCS DCHTTTTPLW  120
RSGPQGPKSL CNACGIRQRK ARRAAMAAAA AAGFGNDNAV VPSISPPPVE IPKPKVQVIK  180
SEKGLDDNNH LDKSHTLPLK KRSKVIDAAR NNNSYIHNNT SNNAKKLCFE DFALSSNKDY  240
LKANSKRSFP RDEEEGAILL MALSCGLACS L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.17e-20GATA family protein