PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022421-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 224aa    MW: 25113.9 Da    PI: 9.6361
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022421-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.8e-15128215499
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      ++ps+v+   +l lp +f+++   + +++  +tl de+g ++   +  rk++    l++GW++F+ a++L +gD+v+F+++++s f  +v ++r
  AUR62022421-RA 128 PMLPSHVTGCFWLGLPSDFCRTSL-P-NNDAAITLVDEEGDEYPTVYLARKTG----LSGGWRGFAMAHELVDGDTVIFQVISHSIF--KVYIIR 214
                     6889****************8873.3.35668***************656665....***********************9998999..999988 PP

                     S CS
              B3  99 k 99 
                     +
  AUR62022421-RA 215 R 215
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGKVSYEESR QKRVEENKKR LEDLNLIHLS QSLKNLSPKS SPMKKVWKPR TVEKKMVAVR  60
RSARVAKNPA PVYVEVHLPR LSSPRKTYGV VRGNYGVATE EERASTIEKA EKLVAKLEEE  120
GYPTVIRPML PSHVTGCFWL GLPSDFCRTS LPNNDAAITL VDEEGDEYPT VYLARKTGLS  180
GGWRGFAMAH ELVDGDTVIF QVISHSIFKV YIIRRSDDVA LEG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.13e-60B3 family protein