PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022423-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 230aa MW: 25685.2 Da PI: 9.4938

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022423-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.4	1.7e-15	134	220	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++ps+v+ +l lp +f++++ + +++ ++tl de+++++ v + rk++ l++GWk+F+++++L +gD v+F+++++s +v ++r AUR62022423-RA 134 PMLPSHVTGGFWLGLPTDFCRRNL-P-TNDGMVTLVDEENEEYPVVYLARKRG----LSGGWKGFAESHELVDGDAVIFQVISSSVL--KVYIIR 220 6899**************9994.3.34459***********555555....9********************8875555..888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MGIGKTSYEE RRQKRVEENK KRLEDLNLIH LSQALKTLSP KSSPMKKVGK PRIFDKQTVE 60 VRRSARVASN PAPVYAEISL PRFSSPRKSY GVVKARDFTN RVIASDDVRE YAIEEAEKLN 120 AKLEEEGFPT LVRPMLPSHV TGGFWLGLPT DFCRRNLPTN DGMVTLVDEE NEEYPVVYLA 180 RKRGLSGGWK GFAESHELVD GDAVIFQVIS SSVLKVYIIR GSGQDSGTD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	11	50	RRQKRVEENKKRLEDLNLIHLSQALKTLSPKSSPMKKVGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	6e-63	B3 family protein