PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022621-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 213aa    MW: 24460.1 Da    PI: 6.3548
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022621-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.23e-32132190159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk++ +prsYYrCt+ +C+vkk+v+r ++d ++v++tYeg Hnh+
  AUR62022621-RA 132 LDDGYRWRKYGQKSVKNNIYPRSYYRCTHLTCNVKKQVQRLSKDSSIVVTTYEGVHNHP 190
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MEVQQKVPRV EVQQKEFSPP LLFSTQYDLQ QCNQANDFEA ATVSDNVDWS SFLIDSPTVK  60
ADSNNEYSHN DKRLDCLEYD NDRQSNGSDF LSGGNNSTRI NNEEENRGSI DHRKAKVVPR  120
FAFQTKSSED ILDDGYRWRK YGQKSVKNNI YPRSYYRCTH LTCNVKKQVQ RLSKDSSIVV  180
TTYEGVHNHP CEKLMEALSP LLNQMQFLSS LT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41570.13e-55WRKY family protein