PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022669-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 250aa    MW: 28785.3 Da    PI: 8.9545
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022669-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.41.2e-52151431128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     +ppGfrFhPt+eel+ +yL+kkv+++k++l +vi evd++k+ePwd+++k+k     +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk +
  AUR62022669-RA  15 VPPGFRFHPTEEELLLYYLRKKVASEKIDL-DVILEVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 108
                     69****************************.99**************964444222455************************************ PP

             NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +s +++ +g++ktLvfykgrap+g+k+dW+mheyrl
  AUR62022669-RA 109 YS-NSSRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 143
                     **.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MRAKMNISVN GESRVPPGFR FHPTEEELLL YYLRKKVASE KIDLDVILEV DLNKLEPWDI  60
QEKCKIGTTP QNDWYFFSHK DKKYPTGTRT NRATAAGFWK ATGRDKVIYS NSSRIGMRKT  120
LVFYKGRAPH GQKSDWIMHE YRLDESTNNN NDNHVTSLRS GDFVQEEGWV VCRVFKKKNH  180
LKDLDSPIKT SSSSMALESH SSISMLDSPG DHDQHDRDDQ GALEQIFQYM GGKSQKINNI  240
TKSSSQHQLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.12e-89NAC family protein