PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022715-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 253aa    MW: 29184.5 Da    PI: 4.7742
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022715-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.91.7e-183284456
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +++ft+eq++ Le+ Fe++ ++  +++ + A++lgL+ rqV +WFqN+Ra++k
  AUR62022715-RA 32 KRRFTDEQVKSLESIFENETKLEPKKKVQVARELGLQPRQVAIWFQNKRARYK 84
                    568*************************************************9 PP
2HD-ZIP_I/II119.22.2e-3831122293
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     +krr+++eqvk+LE+ Fe+e+kLep++Kv++areLglqprqva+WFqn+RAR+k+kqlEk+y++Lk++y++l+++ e L+ke+++L  +l++
  AUR62022715-RA  31 NKRRFTDEQVKSLESIFENETKLEPKKKVQVARELGLQPRQVAIWFQNKRARYKSKQLEKEYSTLKSNYNSLAKRFEDLKKEKQSLVLQLQK 122
                     69************************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MMFDDGDYYS PSDVFSCINS LPNSKKSKMM NKRRFTDEQV KSLESIFENE TKLEPKKKVQ  60
VARELGLQPR QVAIWFQNKR ARYKSKQLEK EYSTLKSNYN SLAKRFEDLK KEKQSLVLQL  120
QKLKDEAEKN QVERKCYDTN DVTNGIIKSQ PEDEKSESEN NINNHNTKKS KECEAKPALS  180
LEGSEYGACS ILSDEGSSEN TNYFRMEEET DILTMVQPVD GSLTSGEGWD DLRPDGLFDQ  240
AVDSCQWWDF WS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46680.22e-48HD-ZIP family protein