PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022735-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Dof
Protein Properties Length: 205aa    MW: 22638 Da    PI: 9.9497
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022735-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.11e-3956117263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     k+++++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  AUR62022735-RA  56 KDQNINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGSLRNVPVGGGSRKNKRSSS 117
                     7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDAAQWPQHQ QVAGFSRAME EIAIANNPNN NNPSNNINNS RATAVVGDQR KARPQKDQNI  60
NCPRCNSTNT KFCYYNNYSL TQPRYFCKTC RRYWTQGGSL RNVPVGGGSR KNKRSSSSLS  120
SSTSNPSINN NNPNKLIPDL NPPSSLSHLI TASHQNPKFL EGHDLNLAFP MQGFPNLQEF  180
KPNMDVFSPP NDHNNMVGSG GGTW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.13e-41Dof family protein