PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62022846-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WOX

Protein Properties

Length: 179aa MW: 20462 Da PI: 8.473

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62022846-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.3	8.2e-21	18	79	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+ps++++++++++l +++ ++V++WFqN++a+e++ AUR62022846-RA 18 KCGRWNPTAEQVRVLTDLFRSgLRTPSTDQIQKISTQLsfygKIESKNVFYWFQNHKARERQ 79 568***************99************************************97 PP
2	Wus_type_Homeobox	114.1	6.9e-37	18	81	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+++L++l++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ AUR62022846-RA 18 KCGRWNPTAEQVRVLTDLFRSGLRTPSTDQIQKISTQLSFYGKIESKNVFYWFQNHKARERQKR 81 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MAASYGSGGG GPPSSGTKCG RWNPTAEQVR VLTDLFRSGL RTPSTDQIQK ISTQLSFYGK 60 IESKNVFYWF QNHKARERQK RRRVSKDHDA PCFQLDDHLK PIAPAKYFGE INQIACEPER 120 AIETLQLFPL NSYHEQESDK LRMFSNDCCK ENYATFAAYT FGRDHFDHPP LDLRLSFF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	84	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	4e-58	WOX family protein