PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023012-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 1025aa MW: 113078 Da PI: 4.7554

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023012-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.9	5.4e-19	49	95	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l AUR62023012-RA 49 RGQWTPEEDEILRKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 95 89***************************9.**********986 PP
2	Myb_DNA-binding	62.9	6.3e-20	101	147	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde ++++v+++G++ W+tIa++++ gR +kqc++rw+++l AUR62023012-RA 101 KGPWSKEEDEVIAQLVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 147 79****************************.***********97 PP
3	Myb_DNA-binding	48.6	1.8e-15	153	195	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +W +eE+++l++a++ +G++ W+ ++++ gRt++ +k++w+ AUR62023012-RA 153 KEAWNQEEELILIRAHQIHGNR-WAELTKYLP-GRTDNAIKNHWN 195 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1025 aa Download sequence
MESDRKIAAS LPPPPPSAPP GSLNGANNAF SQVRPMHGRT SGPTRRSTRG QWTPEEDEIL 60 RKAVQRFKGK NWKKIAECFK DRTDVQCLHR WQKVLNPELI KGPWSKEEDE VIAQLVNKYG 120 PKKWSTIAQH LPGRIGKQCR ERWHNHLNPS INKEAWNQEE ELILIRAHQI HGNRWAELTK 180 YLPGRTDNAI KNHWNSSVKK KLDSYIASGL LAQFQGLPLV GHQSQSMPTA SLLVQQSSGE 240 GSVFKEGAEL EQNSESSQVG CSQSASDLSN TACQTKEDFL LSEESDHGKF QNASPTASCS 300 EQYYTEDITF TIPDLPYEFS CSSKYLENNF SREHGVCATG NSSFGTISLP NVSSMELGAD 360 SSNLSGNYYF ADPMSDMVPG PSHHSIKYDA LASVSNVAVN SDTSVLRQKT EEDCSELLLE 420 QEGGNGCPVN ITNCSEIIDM DRFRDYLSFQ AIFQLPETSG NVALQPNTPL EPSNCEPSNP 480 CEEFNQISDS LAISEAQDIA NVDEGFFPAY NNSGSSFYDH INAGLTEQTE LQEPSRLVPV 540 NTFSPEASDN QNIESSAVER PENATCKLEA GTLCYEPPRF PCLDIPFFSC DLAQPGNDVH 600 QEFSPLGIRQ MVMSSMNSLT PIWDSPSRDG SPVAVLKSAA KTFACTPSIL KKRHRDLLSP 660 LSPFSDRRCD KKTGSSSKQE FLCTSRLTNE LSRLDVMFDE ADDSKESASN DLNNHASIED 720 KENICPALEG EVEEASHNHA ESGDKIEENK KDFKDMEKEE NLEQILEKSV HEDCTAETPK 780 GVLVERYFSD TQYTSLDGAG PKTGSEIGGK TLEVHSAKMT SKQQAAMPES MTSKAKSVVS 840 PPLFVQKKQN IDSDSLINEV GAENLNIFGG TPFRRSIESP SAWKSPWYFS SVIACSRFEA 900 EAMIEDIGIF MSPGDRSYDA LGLMKQINEQ SAEAYADARE VLGSETPESI LRQRCLKSQN 960 LEDQSNKFAD SQLDSRLHLA SNVSSERRVL DFSECGTPAK AAEKGKSVTA ASLSSPSCLL 1020 KSYR*

Sequence ? help Back to Top

Protein Sequence Length: 1025 aa Download sequence

MESDRKIAAS LPPPPPSAPP GSLNGANNAF SQVRPMHGRT SGPTRRSTRG QWTPEEDEIL  60
RKAVQRFKGK NWKKIAECFK DRTDVQCLHR WQKVLNPELI KGPWSKEEDE VIAQLVNKYG  120
PKKWSTIAQH LPGRIGKQCR ERWHNHLNPS INKEAWNQEE ELILIRAHQI HGNRWAELTK  180
YLPGRTDNAI KNHWNSSVKK KLDSYIASGL LAQFQGLPLV GHQSQSMPTA SLLVQQSSGE  240
GSVFKEGAEL EQNSESSQVG CSQSASDLSN TACQTKEDFL LSEESDHGKF QNASPTASCS  300
EQYYTEDITF TIPDLPYEFS CSSKYLENNF SREHGVCATG NSSFGTISLP NVSSMELGAD  360
SSNLSGNYYF ADPMSDMVPG PSHHSIKYDA LASVSNVAVN SDTSVLRQKT EEDCSELLLE  420
QEGGNGCPVN ITNCSEIIDM DRFRDYLSFQ AIFQLPETSG NVALQPNTPL EPSNCEPSNP  480
CEEFNQISDS LAISEAQDIA NVDEGFFPAY NNSGSSFYDH INAGLTEQTE LQEPSRLVPV  540
NTFSPEASDN QNIESSAVER PENATCKLEA GTLCYEPPRF PCLDIPFFSC DLAQPGNDVH  600
QEFSPLGIRQ MVMSSMNSLT PIWDSPSRDG SPVAVLKSAA KTFACTPSIL KKRHRDLLSP  660
LSPFSDRRCD KKTGSSSKQE FLCTSRLTNE LSRLDVMFDE ADDSKESASN DLNNHASIED  720
KENICPALEG EVEEASHNHA ESGDKIEENK KDFKDMEKEE NLEQILEKSV HEDCTAETPK  780
GVLVERYFSD TQYTSLDGAG PKTGSEIGGK TLEVHSAKMT SKQQAAMPES MTSKAKSVVS  840
PPLFVQKKQN IDSDSLINEV GAENLNIFGG TPFRRSIESP SAWKSPWYFS SVIACSRFEA  900
EAMIEDIGIF MSPGDRSYDA LGLMKQINEQ SAEAYADARE VLGSETPESI LRQRCLKSQN  960
LEDQSNKFAD SQLDSRLHLA SNVSSERRVL DFSECGTPAK AAEKGKSVTA ASLSSPSCLL  1020
KSYR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein