PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023070-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 208aa    MW: 22607.1 Da    PI: 6.3557
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023070-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA50.75.9e-16172206136
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrk 36 
                     +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +k+rk
  AUR62023070-RA 172 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKARK 206
                     69****************************.99888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MPSNAGNVED RFQVDGGDKS PNMLFGQPWW PGLNNNGVSP TSASNDSSTR SSSGEPVNGS  60
SLVGPFSLHI NGMQDTGASV YREIHTSLAP QSEAERDNTQ ETKQVPSSMP QNLGDQSNSQ  120
IELVGHSIAM TSYPFQDPTY GGAMSYAQVQ QVIPQLYGLH QSMMPLPLAM EEEPVYVNAK  180
QYHGILRRRQ SRAKAELEKK VIKARKA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.15e-28NF-YA family protein