PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023162-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MIKC_MADS
Protein Properties Length: 257aa    MW: 29837.2 Da    PI: 8.6114
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023162-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.21.9e-27955147
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                    krienk+ rqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+
  AUR62023162-RA  9 KRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLF 55
                    79*******************************************97 PP
2K-box88.51.3e-291011841699
           K-box  16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     ++  e+ kL +++e Lqr+ Rh++Ged + Lsl+eLq+LeqqL+ +lk+iRskKn+l++e+i++l kkek++qe+n++L+k ++
  AUR62023162-RA 101 TWAMEYPKLVARLEVLQRNMRHYVGEDTDALSLRELQHLEQQLDIALKRIRSKKNQLMHESISQLHKKEKAMQEQNNQLSKLMK 184
                     6899***************************************************************************98766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGRGKVELKR IENKISRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFDSMER  60
ILERYERYCY AERQLLATDS ESQQEVIVKQ SYYIHYVVSG TWAMEYPKLV ARLEVLQRNM  120
RHYVGEDTDA LSLRELQHLE QQLDIALKRI RSKKNQLMHE SISQLHKKEK AMQEQNNQLS  180
KLMKENDKRV EEPQKDDQNP SQLFLLPTSK PFPFPALTIG GAYQEMRELE EQADPEAEVP  240
ARTNTNIPAW MFSHVG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-80MIKC_MADS family protein