PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023242-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 211aa MW: 23981.2 Da PI: 8.7309

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023242-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed++l+d++k++G g+W++ + g+ R++k+c++rw++yl AUR62023242-RA 14 KGAWTHQEDQKLIDYIKLHGEGCWRSLSMAAGLDRCRKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	50.8	3.8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w++ AUR62023242-RA 67 RGNFAQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSC 111 8999****************.*****.*********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MREPYYCSKD GRNKGAWTHQ EDQKLIDYIK LHGEGCWRSL SMAAGLDRCR KSCRLRWLNY 60 LRPDIKRGNF AQDEEDLIIK LHALLGNRWS LIAGRLPGRT DNEVKNYWNS CLRKKLICMG 120 IDPNNHKLYH HLPHQKIPQQ PLGSPIAISS ESNKNNSNAC SSKPSLKSHG TNATNNDDDM 180 NTEKNYAIAC TGEETSPMLD LNLKLAFEMP *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-64	MYB family protein