PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023549-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 330aa    MW: 36939.4 Da    PI: 6.8822
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023549-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.49.1e-151663148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++ Ed +l+  ++++G ++W++ ++  g+ R++k+c++rw +yl
   AUR62023549-RA 16 KGPWSQAEDFKLISFIQKYGHNNWRALPKLAGLARCGKSCRLRWVNYL 63
                     79********************************************97 PP
2Myb_DNA-binding52.71e-1669114148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T++E+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l
   AUR62023549-RA  69 RGDFTPQEEEVIIKLHETLGNK-WSKIASHFP-GRTDNEIKNVWNTHL 114
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGKGRKPCCD KAGVKKGPWS QAEDFKLISF IQKYGHNNWR ALPKLAGLAR CGKSCRLRWV  60
NYLRPDLKRG DFTPQEEEVI IKLHETLGNK WSKIASHFPG RTDNEIKNVW NTHLKKRLKE  120
KRSSNDSPIS CNASSSTNTP NEITIDGSDN NQHCYKQVLT QQTITNNDTI EYSSSSSTSS  180
NSQASCSDHQ MIENVEHPNK DETSACVGKN IENISLDELI EIPFEPNLDL WDLLHGDNNE  240
VQFKDVDTPI IYENDNKNEN VKQGEQDLCS AVLTTALPST RYREQCDCWR SESCAQVQMT  300
RVLCGAFGLS ISIRCYLAGG GVGSLCVRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79180.11e-73MYB family protein