PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023796-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 136aa    MW: 15012.2 Da    PI: 8.6975
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023796-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.92.7e-0633721054
                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + R +++ +++ +L++l+ +      +K + a++L +A+eYI+ L
  AUR62023796-RA 33 KERKEKLGEKITTLQQLVSPY-----GKTDTASVLHEAMEYIRFL 72
                    788899999*********999.....9****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MTELKRSVGS IDQDSFASVA SKRQKVDISM SSKERKEKLG EKITTLQQLV SPYGKTDTAS  60
VLHEAMEYIR FLHEQVKVLS APYLNNTPDT IIEEQVHYSL RSKGLCLVPI ECTAGLARSN  120
GADIWAPIKT GSPRF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.32e-58bHLH family protein