PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023859-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

DBB

Protein Properties

Length: 244aa MW: 27010.4 Da PI: 4.6978

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023859-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21	7e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+++++ C ++ lC++C +e H H++ AUR62023859-RA 4 QCDVCERNPATVICCADEAALCAKCDTEVHAAnklaskHQR 44 7*****************************65677777776 PP
2	zf-B_box	31	5.3e-10	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + ++C+ ++ek + +fC +++ l+C+dC +++H H AUR62023859-RA 53 KLPTCDICQEKTAFIFCVEDRALFCQDCDESIHAAatraanH 94 689******************************655555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MKIQCDVCER NPATVICCAD EAALCAKCDT EVHAANKLAS KHQRLQLNCL SSKLPTCDIC 60 QEKTAFIFCV EDRALFCQDC DESIHAAATR AANHQRYLAT GIRVALGCLS KCRNETEKNC 120 TEPSNQNAPQ VAVKQPVQQP PNFSPPSSWA VDDLLEFTDF DTDNKKGQLE LGEFDWWSDM 180 SLFGEQIPHE ALAAAEVPQL PMSIPSNHTV QYRPTKTSMP NKKPRIEIAH DDDDEYSIVP 240 DLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	2e-93	DBB family protein