PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024057-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 185aa    MW: 20680.8 Da    PI: 9.6657
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024057-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1674.7e-2165161190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     +fY++Y++  GF vr +++k+ k++++++ + ++C+k+g++++  +k       ++ ++r+ + +r+gC+a++ +k+++dgkw+v+ +++ H+H+
  AUR62024057-RA  65 DFYKQYGRFGGFVVRLDTEKRIKDSDKVYLKYLYCNKQGFAKDGGTKarvakkdEKPKSRKITINRVGCNAMIGLKEHSDGKWMVYVFHESHSHN 159
                     6*****************************************99998999998777788888999****************************** PP

            FAR1  89 la 90 
                     la
  AUR62024057-RA 160 LA 161
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEEESEEGSC SNTSTTTNVA ENLLSLKGPS VCYTPRGTKE FIPCCPPELK PKLGMTFDSL  60
LKGVDFYKQY GRFGGFVVRL DTEKRIKDSD KVYLKYLYCN KQGFAKDGGT KARVAKKDEK  120
PKSRKITINR VGCNAMIGLK EHSDGKWMVY VFHESHSHNL ASPNTMNFLA NVGNLKLGQK  180
KIHF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-16FAR1 family protein