PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024074-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 174aa    MW: 19162 Da    PI: 6.5012
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024074-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26031.45.4e-103564799
          DUF260 47 kal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
                    ++l ++e+r++a++slv+eA +r++dPv G +g ++k+  +l++ +++++++ +
  AUR62024074-RA  3 RNLhNDEDRKRAADSLVWEALCRQKDPVFGPYGEYRKIYDELKSYQNQAHAQVH 56
                    55524567**************************************99987655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MVRNLHNDED RKRAADSLVW EALCRQKDPV FGPYGEYRKI YDELKSYQNQ AHAQVHHQTG  60
QFVAQNGHTN GSVYKTENGL IGWSVNTNGS AGINKVNYNG GIHENVGLVD CIRAQCGPVI  120
GSSIYGNCGS QDDLHGAENL RQDMDVNVGS VVPQQQHLLN GFNHGQHYYL PGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.12e-18LBD family protein