PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024101-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 249aa    MW: 28076.9 Da    PI: 9.4659
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024101-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.95.1e-50311761128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee.......v.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                     lppGfrFhPtdeel+++yL+ kv +++ ++++       v i evd++++ePwdLp+++k +e+ewy +s rd+ky++g r+nrat++gyWkatg
  AUR62024101-RA  31 LPPGFRFHPTDEELITFYLASKVFNTTPTTTNlflsnsgVqIIEVDLTRCEPWDLPERAKMGEREWYLYSLRDRKYPSGLRTNRATETGYWKATG 125
                     79**********************99944434555556655***************99999********************************** PP

             NAM  88 kdkevlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     kdk+v+++          +g l+g+kktLvfy+grap+g+kt+W+mheyrl
  AUR62024101-RA 126 KDKQVYATgitttagsggGGMLIGMKKTLVFYQGRAPRGVKTKWIMHEYRL 176
                     *******977777766666666***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MWKVEDVLRE LKEEGIFEEN NGKFSDKDGG LPPGFRFHPT DEELITFYLA SKVFNTTPTT  60
TNLFLSNSGV QIIEVDLTRC EPWDLPERAK MGEREWYLYS LRDRKYPSGL RTNRATETGY  120
WKATGKDKQV YATGITTTAG SGGGGMLIGM KKTLVFYQGR APRGVKTKWI MHEYRLDGHF  180
SSFRLSSKVL IHTMLSEKAD IRRMGDMQNI PQECRKEILS TNSSSTFFAT AAAAAAFISF  240
PKQFTSFG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.18e-63NAC family protein