PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024115-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YC
Protein Properties Length: 129aa    MW: 14765.1 Da    PI: 10.1645
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024115-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC48.32.2e-1513951798
           NF-YC 17 knhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98
                     + ++P  r+kki+k+d+d+++i++ea  l+s a elf+  lt +s   a e+kr+ +k   +  av+r + + dfl+d  p 
  AUR62024115-RA 13 LKPSFPTGRVKKIVKFDKDITRITSEALFLVSGATELFLHFLTEKSAEIAVEKKRKNIKVDYLRLAVKRHQpTRDFLLDSLPM 95
                    45689**************************************************************9976489*****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 129 aa     Download sequence    
MADEEEIHSS ETLKPSFPTG RVKKIVKFDK DITRITSEAL FLVSGATELF LHFLTEKSAE  60
IAVEKKRKNI KVDYLRLAVK RHQPTRDFLL DSLPMPSSQP LDEPPADRTV KRKSVLPPNT  120
RRIDSFFW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.13e-42NF-YC family protein