PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024357-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 421aa MW: 47054.8 Da PI: 6.6564

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024357-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.2	4.3e-34	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerFveav+qLGG++kAtPkt+++lm+++gLtl+h+kSHLQkYRl AUR62024357-RA 44 KPRLKWTPDLHERFVEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	66.4	5.2e-21	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++v+av+qlGg t+kt+++ mg g+tl+++ks++qky+ AUR62024357-RA 46 RLKWTPDLHERFVEAVNQLGGAdkaTPKTVMKLMGiPGLTLYHLKSHLQKYR 97 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MFHHPTQTNM YASTRMPAPQ ERQLFLQGGN GSRDSNLVLS TDAKPRLKWT PDLHERFVEA 60 VNQLGGADKA TPKTVMKLMG IPGLTLYHLK SHLQKYRLSK NIHGQTSSGA NKTVVMSGDK 120 IPETGPSHTS SINIAHQTNK NLHINEALQM QIEVQRRLHE QLEVHDPVYF QFKQNGLSPN 180 AETTTAAQNL QRHPKNSRDK DVQRRLQLRI EAQGKYLQSV LEKAQETLGK QNIGVVGLEA 240 AKLQLSELVS KVSNQCLNLA FAEMEEEQHG VCPKQQIQPH KPIGDCSIDS CLTSCDGPQL 300 REQDMQNSEL GLRPYNDTRF LEGNDFNGNL KEHATILFPT TTQQDTEKMV FQMEGTCSDL 360 SMSVGIGGDT QDQLEKNTFQ LDNKNYKLAP FSSDLDLNAQ DEHDVPSSIR HLDLNGLSWA 420 *

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MFHHPTQTNM YASTRMPAPQ ERQLFLQGGN GSRDSNLVLS TDAKPRLKWT PDLHERFVEA  60
VNQLGGADKA TPKTVMKLMG IPGLTLYHLK SHLQKYRLSK NIHGQTSSGA NKTVVMSGDK  120
IPETGPSHTS SINIAHQTNK NLHINEALQM QIEVQRRLHE QLEVHDPVYF QFKQNGLSPN  180
AETTTAAQNL QRHPKNSRDK DVQRRLQLRI EAQGKYLQSV LEKAQETLGK QNIGVVGLEA  240
AKLQLSELVS KVSNQCLNLA FAEMEEEQHG VCPKQQIQPH KPIGDCSIDS CLTSCDGPQL  300
REQDMQNSEL GLRPYNDTRF LEGNDFNGNL KEHATILFPT TTQQDTEKMV FQMEGTCSDL  360
SMSVGIGGDT QDQLEKNTFQ LDNKNYKLAP FSSDLDLNAQ DEHDVPSSIR HLDLNGLSWA  420
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.3	1e-111	G2-like family protein