PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024391-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 193aa    MW: 21450.4 Da    PI: 8.9571
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024391-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.64.5e-05108130123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C +Cgk F  + + ++H +++
  AUR62024391-RA 108 FMCRKCGKAFAVRGDWRTHEKNC 130
                     89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MGLVVSNLRM GLVVSNLGMG MGVSGGGRGY GYGEGDAGVV MHMWGHGSQY RKGPESLRGT  60
QPTGMLRLPC YCCAPGCKNN IDHPRAKPLK DFRTLQTHYK RKHGIKPFMC RKCGKAFAVR  120
GDWRTHEKNC GKLWYCICGS DFKHKRSLKD HIKAFGHGHA AYGVDGFEEE DEPASEIEHD  180
NEESHHSRNH QH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-100C2H2 family protein