PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024413-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 146aa    MW: 16603.5 Da    PI: 10.2685
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024413-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.93e-3271126258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ep+YVNaKQy++I++RRq+Rak+e e++   k+rkpylheSRh hAlrR+RgsgGrF
  AUR62024413-RA  71 EPIYVNAKQYHGIMRRRQSRAKAELENRA-VKTRKPYLHESRHLHALRRQRGSGGRF 126
                     8****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MARLIMSLVG KYGEQQKQEQ HGVFPMDHHQ IIHDYNMPIS HQTGLPQHNT GYYEGIHSNG  60
VPLPGEAANY EPIYVNAKQY HGIMRRRQSR AKAELENRAV KTRKPYLHES RHLHALRRQR  120
GSGGRFLNTK QSDGPTSSNS SNQYS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.13e-36NF-YA family protein