PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024470-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 590aa MW: 68091.6 Da PI: 4.9251

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024470-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.9	1.4e-07	138	190	47	90
FAR1 47 k.........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + ++++ r+ + tr +Cka+++ k +k+g++ev + +HnHel+ AUR62024470-RA 138 EmvdeedvnvKTRKPRQVSITRSNCKACIREKVNKEGQFEVVAHVIQHNHELT 190 15555566556778888899*******************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 590 aa Download sequence
MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA 60 DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATEDTNPI DAYGLDLRGS 120 FVGVGKRHSG QKKTKLVEMV DEEDVNVKTR KPRQVSITRS NCKACIREKV NKEGQFEVVA 180 HVIQHNHELT KPQWNYLHRS ERKMTEEKVV TIKTMKSSGL TTMDTYNYMA TEAGGEQNIG 240 HSVVDHLNFC SRLRMEQIEA GDAQTLVNIL SQEQSEDPNF FFRVKFDKEG RICNIFWRDS 300 MMLEDYRIYG DVLVFDTTYR TNRYNLICAP FVGINNHWHN CMFACAFIGD ETTNSFVWLL 360 QTFFKAMEDR KPTSIFTDQD QAMANAILEV IPNTKLSLCI WHLEQNAITR YGALKKDKEF 420 KFAFNQCLKM CVTEQEFEAK WQAMLQKYEL TEHSWYKRVY ELKDKWCPAL CRDFFSAGIL 480 SSQRSESTNH AIGFRASKAT TLTEFYTIFK KTTNRWRSTE KYDEFTCSKS IAFPSLPLSG 540 MLKHAAEVFT LSLFRNFEEE FGYSMATTVQ MLGSNEECLL YQVTLEDKP*

Sequence ? help Back to Top

Protein Sequence Length: 590 aa Download sequence

MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATEDTNPI DAYGLDLRGS  120
FVGVGKRHSG QKKTKLVEMV DEEDVNVKTR KPRQVSITRS NCKACIREKV NKEGQFEVVA  180
HVIQHNHELT KPQWNYLHRS ERKMTEEKVV TIKTMKSSGL TTMDTYNYMA TEAGGEQNIG  240
HSVVDHLNFC SRLRMEQIEA GDAQTLVNIL SQEQSEDPNF FFRVKFDKEG RICNIFWRDS  300
MMLEDYRIYG DVLVFDTTYR TNRYNLICAP FVGINNHWHN CMFACAFIGD ETTNSFVWLL  360
QTFFKAMEDR KPTSIFTDQD QAMANAILEV IPNTKLSLCI WHLEQNAITR YGALKKDKEF  420
KFAFNQCLKM CVTEQEFEAK WQAMLQKYEL TEHSWYKRVY ELKDKWCPAL CRDFFSAGIL  480
SSQRSESTNH AIGFRASKAT TLTEFYTIFK KTTNRWRSTE KYDEFTCSKS IAFPSLPLSG  540
MLKHAAEVFT LSLFRNFEEE FGYSMATTVQ MLGSNEECLL YQVTLEDKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-80	FAR1 family protein