PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024595-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 312aa    MW: 35516.9 Da    PI: 7.3579
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024595-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.9e-144288248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g+W +eEd +l  a++ +G g+W+t a   g++R++k+c++rw++yl
   AUR62024595-RA 42 GPWIPEEDSKLSSAIATHGVGRWNTLAVLAGLKRSGKSCRLRWLNYL 88
                     79*******************************************97 PP
2Myb_DNA-binding27.47.7e-091371582446
                      HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  24 WktIartmgkgRtlkqcksrwqk 46 
                      W++Ia++++ gRt++++k++w++
   AUR62024595-RA 137 WSKIAQHLP-GRTDNEIKNYWRT 158
                      *********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEYQKSSSSS NNAYYTNERW ESIIRVVRDE EDELLNNGLR QGPWIPEEDS KLSSAIATHG  60
VGRWNTLAVL AGLKRSGKSC RLRWLNYLRP DLRRPWTNSY EFLSFTLVAA RGMQQSMHIS  120
VVYVIVLGIS MSLMLWWSKI AQHLPGRTDN EIKNYWRTKV QKLARHFHCH VNSPQFRNAL  180
RNIWIPRLVE QIQAGATTSS TTTKPLIHGP TFHSGNGLFD GLNTCTSTIS SDNCCFFNTT  240
HSSWTQNSFM VGPPELCPKP NVSTDSSEAH ISPASGSSVE LDQNWDHIND YLREMTLNDE  300
DNMLLWETLH N*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.12e-49MYB family protein