PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024616-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 188aa    MW: 21080.3 Da    PI: 9.7084
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024616-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.66.9e-111163255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                    +  hn+ E+ RR ++N+ f  Lr+llP  +   ++kK  s   i  +A +Y+ +Lq
  AUR62024616-RA 11 KLDHNAKEKVRRMKLNETFLVLRSLLPDsR---RAKKrWSGPYIIDRALDYVPQLQ 63
                    678*************************66...77777****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
GGVREGSSCK KLDHNAKEKV RRMKLNETFL VLRSLLPDSR RAKKRWSGPY IIDRALDYVP  60
QLQAEIEKLT IEKSNMLSVL GKKQQVVVGS SDVRDHANKD KRTLTVSMNE VKKGEVIVQI  120
CEQNNKDGIL STLIEKLEGQ GIHVLGASSQ RACEDRSCFH LHFQMGESPV EADYVAVLHK  180
KIISWLS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71200.16e-28bHLH family protein