PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024627-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 264aa MW: 30707.4 Da PI: 6.5891

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024627-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.5	2.2e-18	79	174	9	90
FAR1 9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 evGFs+rk++++++ +++ +t++ +vCs egkr++ kk ++++ r+ + trt+Cka+l+ k+++dgk++v + +l+HnHel AUR62024627-RA 79 EVGFSIRKHTTRYRLHTRIVTEKYYVCSAEGKRHTAAKKtnmvlmvdednkdlKQRKPRQVSITRTKCKASLRTKMNDDGKFKVVSHVLQHNHEL 173 79*******************************99999*******98888999999******************************9 PP FAR1 90 a 90 + AUR62024627-RA 174 T 174 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MPETSKASNY KNLMREFLQL QRENRPPLTQ HPEKTWSFDL NQTFREDIEN QGVSNTLEDE 60 DQVIPNTLDE EGQPVDEDEV GFSIRKHTTR YRLHTRIVTE KYYVCSAEGK RHTAAKKTNM 120 VLMVDEDNKD LKQRKPRQVS ITRTKCKASL RTKMNDDGKF KVVSHVLQHN HELTRKQWHY 180 LHRSEREVTI EKAEAIKTMK SAGLSTMDTY NYMCTEANGE ENLGHSVVDH LNFCSRLRME 240 QIEAGDAQTL VNILIEEQKE DPN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-19	FAR1 family protein