PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024713-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 296aa MW: 33234.3 Da PI: 6.6689

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024713-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.5e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+llv++++++G +W++ +++ g+ R++k+c++rw +yl AUR62024713-RA 14 KGPWTPEEDQLLVNYIHLHGHSNWRALPKHAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53.9	4.2e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l AUR62024713-RA 67 RGNFTQEEEDTIINLHQMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MGRAPCCEKM GLKKGPWTPE EDQLLVNYIH LHGHSNWRAL PKHAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TQEEEDTIIN LHQMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKRLPKPE 120 IDSATAMTTT VDTTSGPTKK RARRLKSSSK DGISEDPPRK HVNVRPTSSN IRDPISPQPC 180 TSEVSTITTS TSSTSENDNC SKENVVKKEG YIGEFPEFND DFWMEVLSVE DTAMSTEDLP 240 SVSQCYLNNS SATEPAAACL TDSKAVAAHS DDMDFFWYNL LTRPDDHLPE FSEML*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	6e-80	MYB family protein