PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024739-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 105aa    MW: 11173 Da    PI: 8.706
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024739-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260121.83.6e-38894186
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
                    +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll +lp ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq
  AUR62024739-RA  8 PCGACKFLRRKCASDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHLPVHDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQ 94
                    7*************************99*********************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MAAGAGSPCG ACKFLRRKCA SDCIFAPYFC SEQGPARFAA IHKVFGASNV SKLLLHLPVH  60
DRCEAVVTIA YEAQARIRDP VYGCVAHIFA LQQQGIVRGA NFST*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.14e-60LBD family protein