PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024758-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family VOZ
Protein Properties Length: 523aa    MW: 58080.8 Da    PI: 5.5649
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024758-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ387.14.6e-1192684851217
             VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 
                     pppsaflgpkcalwdc rpaq se +++ycs+fha+la++e +pgt p++rp+gi+lkdg+lf al++k +gk+vgipec gaa+akspwn++el
  AUR62024758-RA 268 PPPSAFLGPKCALWDCVRPAQMSEFCNNYCSAFHAELAVKECPPGTVPIMRPGGIGLKDGPLFVALKSKLEGKDVGIPECLGAASAKSPWNTPEL 362
                     89********************************************************************************************* PP

             VOZ  96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190
                     fd+s+le e irewlffdkprrafe+gnrkqrslpd++grgwhesrkq+ ke++g+krsyy dpqp++ +ewhl+eyei+++ ++alyrlelk++
  AUR62024758-RA 363 FDISILEDEKIREWLFFDKPRRAFETGNRKQRSLPDHEGRGWHESRKQIAKEYNGQKRSYYADPQPQKDLEWHLFEYEIYNCSTCALYRLELKVA 457
                     *********************************************************************************************99 PP

             VOZ 191 de.kksakgkvskdsladlqkklgrlta 217
                     +e kks+k+kvs+d+l+dlqk++grlta
  AUR62024758-RA 458 EEkKKSPKTKVSSDPLVDLQKQMGRLTA 485
                     7626799*******************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    
MGKDSKNCKQ PSHRLLKDQA KNRIEGLQSV FNELQGAMKE SRAGDVATLE EQVKQMLCEW  60
KADLSEPTPT SSVPEDSLGS FSKELGQLLQ QFDVEDDATS PLTAPPITRH SDATCTFAVP  120
NSVGDVEVCY LNHTPQQQNF QGFQIHTPQQ HDFEGFQNHI SQHGFPDLDN HTPQHHELPG  180
FVNHTPESQD YQGFARCNNA ATNMQGGMIN NFEASGLHNM VPNNFNMTTQ LDEHHNLDSE  240
IFISASGIEN WGLDDIPDFL GVLPNVNPPP SAFLGPKCAL WDCVRPAQMS EFCNNYCSAF  300
HAELAVKECP PGTVPIMRPG GIGLKDGPLF VALKSKLEGK DVGIPECLGA ASAKSPWNTP  360
ELFDISILED EKIREWLFFD KPRRAFETGN RKQRSLPDHE GRGWHESRKQ IAKEYNGQKR  420
SYYADPQPQK DLEWHLFEYE IYNCSTCALY RLELKVAEEK KKSPKTKVSS DPLVDLQKQM  480
GRLTAEGSAE NKRSGKGKAK VSMNSDHGPN IVSETNGSGG SS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-146VOZ family protein