PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024945-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 324aa    MW: 36549.7 Da    PI: 6.6369
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024945-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-151360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEd++l   +  +G g+W+++++  g+ R++k+c++rw +yl
   AUR62024945-RA 13 RGLWSPEEDDRLTTHIINHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60
                     788*******************************************97 PP
2Myb_DNA-binding54.13.7e-1766109146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T+eE+  ++++++ lG++ W+ Ia++++ gRt++++k++w++
   AUR62024945-RA  66 RGSFTEEEERTIIEVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109
                      89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGHHCCSKQK VKRGLWSPEE DDRLTTHIIN HGHGSWSSVP KLAGLQRCGK SCRLRWINYL  60
RPDLKRGSFT EEEERTIIEV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLLAQGF  120
DPNTHNLLQK KSKSKTNPTK TSNHHRFPSN SSSLIFSDDH ESQTCFPKVD NEIELQNNSI  180
NFECNNNSAS YTQMHNIVPT SDFSSNEFLA MNKSNPISND VNLCGYTLDE NSIWSNTTRL  240
ENFEQPMQTT QVIPTQEIIG GANDYDLDAS LFNMLSINYG FEDYPASTTI LPGAGVYGGE  300
MGYAMDQVAW CEGNNFQCGS FAL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.17e-81MYB family protein