PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025021-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LBD
Protein Properties Length: 209aa    MW: 22936.1 Da    PI: 5.9106
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025021-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26057.44.2e-188714146100
          DUF260  46 lkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
                      k+lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q++ l+a+la++++e
  AUR62025021-RA  87 AKDLPESQRADAVSSMVYEANARLRDPVYGCAGAICQLQKQVNDLQAQLAKAQAE 141
                     6889***********************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MLALALPARS CAGDALINVF WHLTFRPLNH SSSPLLTGFL GLAILLNFSS LNLYLGITIW  60
RELSLCEWNK EQSRPCLGHC SQKNDKAKDL PESQRADAVS SMVYEANARL RDPVYGCAGA  120
ICQLQKQVND LQAQLAKAQA EILNMKCQQT NLLALICMEM AHDHDESPPS NTSSQSVSPE  180
HPNRGVSNNA CFIDDNNLGG SLWEPLWT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.14e-32LBD family protein