PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62025146-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 242aa MW: 27828.4 Da PI: 5.6442

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62025146-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.5	4.8e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G +W+ I++ g+ R++k+c++rw +yl AUR62025146-RA 14 KGAWSPEEDNKLKSYIQRYGHWNWREIPKFAGLARCGKSCRLRWINYL 61 79****************99**********************97 PP
2	Myb_DNA-binding	52	1.6e-16	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++++E++ +++++kqlG++ W++Ia+ ++ gRt++++k++w++ AUR62025146-RA 68 GDFSKDEEDFIIKLHKQLGNR-WSKIAASLP-GRTDNEIKNYWHT 110 679****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MVKKPVIDEN GLKKGAWSPE EDNKLKSYIQ RYGHWNWREI PKFAGLARCG KSCRLRWINY 60 LRPNVKHGDF SKDEEDFIIK LHKQLGNRWS KIAASLPGRT DNEIKNYWHT QLKKRLSGNI 120 SQNSSSNSET VDTFCNTSTD HDRNDLASTA DKTLCLSSLD SMGSALLDES FWTEPFALET 180 SEQNYCDLDL SLLDEGMLLS PVTSYWEYMD FLYSFLQMLM AISNEDLMLA FNLHVCIYPN 240 L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	8e-57	MYB family protein