PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025174-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 257aa    MW: 28442.8 Da    PI: 9.5065
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025174-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.45e-33108164158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep++VNaKQy++Il+RRq+Rak+e+++kl +k+rkpylheSRh hAl+R RgsgGrF
  AUR62025174-RA 108 DEPIFVNAKQYHGILRRRQSRAKMEAQNKL-IKARKPYLHESRHLHALNRVRGSGGRF 164
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MDSPPQLHLN ARSLGFHLQD QDSPSSQEVN CGKNLGQMKP MYLMGHPEAG FNIGQMDYNR  60
AMGCMPYPCG DPYYNGILNT YGTTPIIQPH MMSMTTTRVP LPLDISEDEP IFVNAKQYHG  120
ILRRRQSRAK MEAQNKLIKA RKPYLHESRH LHALNRVRGS GGRFLSTKKQ QQSDSTSNRN  180
HSISGSNAYN NMVFESHQSQ CMATGTSSIS TTNGNSFYQQ QDGGFLGISS SHTGGAMQHN  240
GGFINNPNQH QAPVVR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-40NF-YA family protein