PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025185-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 291aa    MW: 33134.7 Da    PI: 9.4422
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025185-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.42.1e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed +l + +k +G g+W+  +++ g++R++k+c++rw++yl
   AUR62025185-RA 14 KGSWTAMEDNILSEFIKTHGEGRWRNLPKRAGLKRCGKSCRLRWLNYL 61
                     799*******************************************97 PP
2Myb_DNA-binding52.51.1e-1667110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++
   AUR62025185-RA  67 RGNISPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110
                      7899******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MGRSPCCAKE GMNKGSWTAM EDNILSEFIK THGEGRWRNL PKRAGLKRCG KSCRLRWLNY  60
LRPGIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT SLSKRLNQHN  120
TNQTANHNLK KPRNDVKNKK KLLPTIDDVP KISTQTIESN VVRTKAVRCT KVFINPQPQQ  180
KIIRANKTTN VAVDQQTSSM DYNVENFWVD HNISSPRLLD EEYKMPSDLM MDVPNMGVFN  240
LISELLKSDF SDICELSNES SKGASDLSPS SPEEPFVLSQ ELLEDWLGNQ *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-60MYB family protein