PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025378-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 217aa    MW: 24196.5 Da    PI: 4.0977
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025378-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.91.1e-121762755
             AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    r+++ +grW+A+I  +     +k+ +lg++ t eeAa a++ a+ +++g
  AUR62025378-RA 17 RRHHHNGRWEARIGRVLG---NKYLYLGTYATQEEAATAYDIAAIQYRG 62
                    89999*******988422...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MKEMDGLSRE EYLGSLRRHH HNGRWEARIG RVLGNKYLYL GTYATQEEAA TAYDIAAIQY  60
RGLNAVTNFD LSRYINLDKP ISPNNNNEVK PSNSKLVEDS SGSTCSSNQS LLLECTSSIE  120
QITHDQVDDA ISIDELLWSS HQQPTIDCSS MLLGFNNEYD DLLLYSVTND NLYSCVDGHQ  180
GGGSIDDVGN NEKDFFSDLS SLLCDFDIME AEQIEM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.24e-29AP2 family protein