PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62025839-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 197aa    MW: 21114.3 Da    PI: 9.8273
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62025839-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-0895142455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+++Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  AUR62025839-RA  95 SHSIAERVRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 142
                     8*************************9....3559999***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MFGKTHVLEQ AQADSAVLSG NGNECSGSGT TNKRKPEDLQ ESSSSLYSSS PTSNDRARKK  60
NSSNRGKRSK NNDKDEGNPK EVVHVRARRG QATDSHSIAE RVRRGKINER LRCLQDIVPG  120
CYKTMGMAVM LDEIINYVQS LQNQVEGRGK EIVGAAGEFL GGQRPQRSGT GSPVAWSLET  180
GCGEGGSGSF GLREGR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.13e-42bHLH family protein