PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026248-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 247aa    MW: 27311.3 Da    PI: 9.1968
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026248-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.64.6e-08102148455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      h ++Er+RR+ + + +  L  ++P +     kK +K ++L  A++++k+Lq
  AUR62026248-RA 102 DHIIAERKRRELLSHMMISLSAMIPGL-----KKIDKTSVLGAAIKHMKELQ 148
                     699************************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MEPTFEEQLA AILGSDFPYP IYTTNDDTAS PEGAFDTIDQ CISTLHTSEN HNDNNNNNKN  60
DSDNIVCSDA RKRQPSKTKK ETKKQAMSVG SKRKRQPGQV QDHIIAERKR RELLSHMMIS  120
LSAMIPGLKK IDKTSVLGAA IKHMKELQEK VKVLESVIAK RTVVVVNKSK LKADNDSSDD  180
NVSSSTVNDC SGVKVMGKAL LLRIFCEKQK GIFVKLFVEA QKHGLSITNF NVAPLSDIAL  240
DITIVAQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
192111KRKRQPGQVQDHIIAERKRR
292133KRKRQPGQVQDHIIAERKRRELLSHMMISLSAMIPGLKKIDK
393112KRKRQPGQVQDHIIAERKRR
4107112ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.26e-32bHLH family protein