PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026373-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YB
Protein Properties Length: 170aa    MW: 19580.6 Da    PI: 8.2225
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026373-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB90.91.3e-281801796
           NF-YB 17 mkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96
                    m++vlP+n++i+++aket+qec+s+fi +v++ea++  + e+rk i+++dl+ a++ l + +y+epl +yl++yre+eg 
  AUR62026373-RA  1 MRQVLPSNGQITDEAKETIQECISKFINYVSKEANEIRKVEQRKVISANDLVAAMSRLKLGHYAEPLLTYLNRYREVEGT 80
                    89***************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MRQVLPSNGQ ITDEAKETIQ ECISKFINYV SKEANEIRKV EQRKVISAND LVAAMSRLKL  60
GHYAEPLLTY LNRYREVEGT DDFIQALRMR QGGYSSLQIH TDCISIVDLL QFQHPKDISV  120
LWIQQELLEF IGSFVVRHVK KVSRSMVAQA HCFADLAHRC NFMRCINFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21970.13e-26NF-YB family protein