PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026577-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 139aa    MW: 16702.1 Da    PI: 8.7043
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026577-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.22e-1633124290
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 
                     +Yn+YAk+ G+ vrk++s ++  +g++++r+f+C + gk+  +  + +k +r++++ r++ ka++ + +++     +++w+vtk+++e nHel 
  AUR62026577-RA  33 YYNNYAKRHGYVVRKDRSDTK--HGRVVRRDFYCRRGGKKPLKVVDMSKPQRQKESCRCDFKAHMCIVLKRcfdifSEEWHVTKFVKERNHELL 124
                     8***************99887..899********************99999999999********998877778889***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MLHFNLNVLA IEEDENEPFI GQTFESQEEA YMYYNNYAKR HGYVVRKDRS DTKHGRVVRR  60
DFYCRRGGKK PLKVVDMSKP QRQKESCRCD FKAHMCIVLK RCFDIFSEEW HVTKFVKERN  120
HELLSYDEMH LLAANRLY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.15e-25FAR1 family protein