PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026883-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 309aa    MW: 33906 Da    PI: 7.0669
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026883-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.45.9e-1640123186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  v  L+ea+++++   +r+klk+++We+v+k++      ++  ++++qCk+k+e+++kry+ + +++        s++p+f++l+
  AUR62026883-RA  40 EWSEGAVSSLLEAYESKWILRNRAKLKGQDWEDVAKHVssraNNTKSPKTQTQCKNKIESMKKRYRSESATADT------SSWPLFSRLD 123
                     5*************************************88777777889999***************9999986......57*****998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEKETNQDDQ NPSPTKLEQS PRKPLLVGGS SGGDRLKRDE WSEGAVSSLL EAYESKWILR  60
NRAKLKGQDW EDVAKHVSSR ANNTKSPKTQ TQCKNKIESM KKRYRSESAT ADTSSWPLFS  120
RLDNLLRGTG GSTGLPSAHS SPMKAIAVSS NPGLVLESSP VALQLPPLPI PLPVPPQQAP  180
PPVEIAQNSH ESNGAEPMAK DCDEVAAKVS DQISDKNHND DDHIETDSST PALYKSIRWL  240
GEAVVRSEQV RMDTMRELER MRVEAEAKRG EMDLKRTEII ANTQLEIARL FASTTGKSVD  300
SSLRIGRS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.12e-93Trihelix family protein