PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026910-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 595aa    MW: 67182.8 Da    PI: 8.3701
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026910-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1371.1e-11299398288
            FAR1   2 fYneYAkevGFsvrkskskks..krngei.tkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 
                     +Yn+++k+ GF v+ s+s ++  k+ +++    t++C + g  +++++          + +   t++++++gC+a++   ++++gkwe+ ++el+
  AUR62026910-RA 299 YYNAFGKHEGFGVVLSRSAYKtlKDGRKVkRAVTWKCECVGLLDTRRRIggerlprelEGEPIPTKKSKKCGCEARMYAGLKDHGKWEIVRVELK 393
                     8************9998877766444444145799*******99998888888888766666779****************************** PP

            FAR1  85 Hn.He 88 
                     H  H+
  AUR62026910-RA 394 HEpHK 398
                     *6465 PP
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    
MDTTVTLEFW HGGVFKEEKK GLTYVGGEGI TCEIDPDELC WWYIEELAKE GGNYCKIEEV  60
YYLMPGLTLG KGLRRVYDDD EVRKMTAIAL KNSNLELYAV HGVSDPKVLP VDASVLERAL  120
HDQVPETKKT LEKLSEGGQK RKKLTPERGP LKTKDATTQP VRVSPRRKKD ESHEKDAPTS  180
TSKPYVLVAE INCSNNSSIN SNPPNTSSPP KTSKPPNTLI PPPEVPSLGQ INNTPATKTV  240
AREKGKTSYQ SEVPLEYEWE DSRPDSPLPY NQLFEVHSEE DNDSLYEPGS ENIDEADMYY  300
NAFGKHEGFG VVLSRSAYKT LKDGRKVKRA VTWKCECVGL LDTRRRIGGE RLPRELEGEP  360
IPTKKSKKCG CEARMYAGLK DHGKWEIVRV ELKHEPHKVS PSKSMLVTKY RLEELEKMRH  420
CIKALEMQQI FDVPSMYILD RWHKDIFRKH IRVKVAFHNP TKTADIVRYD KMMVVFEPIS  480
NLASDNDETM MMVIEGMKEL EMKVKEKTTT PALPMSSVGE TEFKSTPPSA NRRTVTFQTS  540
SSVAKSVVQG VVVAGERVEQ FERHVIIVGS IKDPSSKRSA GVVRCTIFMT TLRR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325368RKVKRAVTWKCECVGLLDTRRRIGGERLPRELEGEPIPTKKSKK