PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026937-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 320aa    MW: 35853.5 Da    PI: 7.5183
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026937-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.9e-162572148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g WT eEd +++ +v  +G g+W+ ++++ g++R++k+c++rw +yl
   AUR62026937-RA 25 KGLWTLEEDAKILAYVSNHGVGNWTQVPKKAGLNRCGKSCRLRWTNYL 72
                     678*******************************************97 PP
2Myb_DNA-binding38.82.2e-1283118946
                      HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++l++++++  G++ W++Ia++++ gRt++++k++w++
   AUR62026937-RA  83 EQLIIQYHAAIGSK-WSLIAKHLP-GRTDNDVKNYWNT 118
                      689***********.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MLLVLVCSDL KIGRPPCCDK ANVKKGLWTL EEDAKILAYV SNHGVGNWTQ VPKKAGLNRC  60
GKSCRLRWTN YLRPDYKHEE FIEQLIIQYH AAIGSKWSLI AKHLPGRTDN DVKNYWNTKL  120
KKKLAKMGID PVTHKHVSKI LSDYESISCL SNNHQIRSLE QNITNSFSSQ CKILPSDNPG  180
TQFKDVTSFN HYILEEVSPS SSSSPTSSIS NGQSSSHLLV PTAAYKEEHN YQGFLAADSL  240
PQILEKSSQF QLIGVNHSNS KVTDDKFGMP DCKSEAKNIV TSSCYDYEPS SVNSFVKTLL  300
DRDNEILLDF PAFDDILDY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.15e-73MYB family protein