PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026947-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 223aa    MW: 25048.3 Da    PI: 9.4544
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026947-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.13.7e-1065125158
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraet 58 
                     +fY++YA+  GF vr   +k+ k++++++ + ++C+k+g++++ ++k   ++ke++++a +
  AUR62026947-RA  65 DFYKQYARFGGFVVRLGIEKRIKDSDNVYLKYLYCNKQGFTKDGETKakvSKKEEKPEARK 125
                     6****************************************99888865534444444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MQEESEEGSC SNTSTTTNVA ENLSSLKGPS VCYTTRGTKE FIPCCPPELK PTLGMLFDSL  60
LKGVDFYKQY ARFGGFVVRL GIEKRIKDSD NVYLKYLYCN KQGFTKDGET KAKVSKKEEK  120
PEARKRTINR VGFVDILPPN KSSNKGSGSG KRKKSDKEIA IEESQRKDRL YRTCGQRTNH  180
DSRNCPQKKS NLYEDFKEES KGCKTTSYLQ EATSATDDLV LK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-07FAR1 family protein