PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62026949-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 254aa    MW: 28398.2 Da    PI: 9.1295
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62026949-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.86.8e-154891146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g WT+eEd +++ +v  +G ++W+ ++++ g  Rt++++k++w++
   AUR62026949-RA 48 KGLWTPEEDAKILAYVSNHGVRNWTQVPKKAG--RTGNDVKNYWNT 91
                     678****************************8..**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MDSNFVAKWD CFLSIFLSFS LLLLLLVLVR SDLKIGRPPC CDKANVKKGL WTPEEDAKIL  60
AYVSNHGVRN WTQVPKKAGR TGNDVKNYWN TKLKKKLAKM GIDPVTHKPI SKILSDYESI  120
SYLSNNHQIR SLNQNITNSF SSQCKILPSD NPGTRFQDVT SFNHYILEEV SPSSSSSSTS  180
SISNGQSSSH LLVPTAAYSW GQKNFVDPLL VTDITEEEHN YEFSSSRFTA PNPGEIIAIP  240
AHWCKPLKQQ GYR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.17e-30MYB family protein